Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
USP46P62068 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
USP46P62068 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.3■□□□□ 0.2
USP46P62068 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.3■□□□□ 0.2
USP46P62068 AC022210.1-201ENST00000449856 793 ntBASIC16.3■□□□□ 0.2
USP46P62068 AC093433.1-201ENST00000458048 571 ntBASIC16.3■□□□□ 0.2
USP46P62068 AC119751.2-201ENST00000504529 210 ntBASIC16.3■□□□□ 0.2
USP46P62068 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.3■□□□□ 0.2
USP46P62068 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.3■□□□□ 0.2
USP46P62068 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 AC025181.2-201ENST00000606994 802 ntBASIC16.3■□□□□ 0.2
USP46P62068 AC017083.2-201ENST00000608069 979 ntBASIC16.3■□□□□ 0.2
USP46P62068 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
USP46P62068 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.3■□□□□ 0.2
USP46P62068 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP46P62068 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.29■□□□□ 0.2
USP46P62068 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 ANKRD19P-201ENST00000338192 862 ntBASIC16.29■□□□□ 0.2
USP46P62068 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.29■□□□□ 0.2
USP46P62068 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP46P62068 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.29■□□□□ 0.2
USP46P62068 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.29■□□□□ 0.2
USP46P62068 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 AC007274.1-201ENST00000439805 662 ntBASIC16.29■□□□□ 0.2
USP46P62068 BCRP2-202ENST00000447763 634 ntBASIC16.29■□□□□ 0.2
USP46P62068 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.29■□□□□ 0.2
USP46P62068 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.29■□□□□ 0.2
USP46P62068 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.29■□□□□ 0.2
USP46P62068 BCRP6-201ENST00000510112 632 ntBASIC16.29■□□□□ 0.2
USP46P62068 BCRP7-201ENST00000511549 544 ntBASIC16.29■□□□□ 0.2
USP46P62068 AP001889.1-201ENST00000525414 633 ntBASIC16.29■□□□□ 0.2
USP46P62068 AC068587.3-201ENST00000526613 355 ntBASIC16.29■□□□□ 0.2
USP46P62068 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.29■□□□□ 0.2
USP46P62068 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC16.29■□□□□ 0.2
USP46P62068 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.29■□□□□ 0.2
USP46P62068 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP46P62068 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 AC092384.3-202ENST00000564646 2873 ntBASIC16.29■□□□□ 0.2
USP46P62068 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.29■□□□□ 0.2
USP46P62068 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.29■□□□□ 0.2
USP46P62068 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP46P62068 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP46P62068 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms