Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
AP3S2P59780 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
AP3S2P59780 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.36□□□□□ -0.27
AP3S2P59780 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
AP3S2P59780 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 AC073439.1-201ENST00000624121 1774 ntBASIC13.35□□□□□ -0.27
AP3S2P59780 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 AC011474.4-201ENST00000623523 2076 ntBASIC13.35□□□□□ -0.27
AP3S2P59780 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 AL031432.2-201ENST00000566714 459 ntBASIC13.35□□□□□ -0.27
AP3S2P59780 AL928711.1-201ENST00000570165 459 ntBASIC13.35□□□□□ -0.27
AP3S2P59780 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
AP3S2P59780 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AP3S2P59780 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
AP3S2P59780 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AP3S2P59780 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.34□□□□□ -0.27
AP3S2P59780 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 AC015802.1-201ENST00000588104 1449 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 TCAF1P1-201ENST00000414990 2232 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AP3S2P59780 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 AC004987.2-201ENST00000395959 1148 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.34□□□□□ -0.27
AP3S2P59780 LAGE3P1-201ENST00000425356 484 ntBASIC13.34□□□□□ -0.27
AP3S2P59780 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AP3S2P59780 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms