Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.18□□□□□ -0.46
FAM3BP58499 KRT18P58-201ENST00000527480 1120 ntBASIC12.18□□□□□ -0.46
FAM3BP58499 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 AC020765.3-201ENST00000613051 740 ntBASIC12.18□□□□□ -0.46
FAM3BP58499 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM3BP58499 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.18□□□□□ -0.46
FAM3BP58499 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
FAM3BP58499 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
FAM3BP58499 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM3BP58499 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM3BP58499 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.18□□□□□ -0.46
FAM3BP58499 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
FAM3BP58499 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
FAM3BP58499 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 PPT1-213ENST00000641319 2388 ntBASIC12.17□□□□□ -0.46
FAM3BP58499 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
FAM3BP58499 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 SIGLEC30P-201ENST00000455569 941 ntBASIC12.17□□□□□ -0.46
FAM3BP58499 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 RNA5SP419-201ENST00000515908 135 ntBASIC12.17□□□□□ -0.46
FAM3BP58499 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.17□□□□□ -0.46
FAM3BP58499 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
FAM3BP58499 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.17□□□□□ -0.46
FAM3BP58499 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 FAM215A-202ENST00000632077 792 ntBASIC12.17□□□□□ -0.46
FAM3BP58499 AP000867.4-201ENST00000641616 219 ntBASIC12.17□□□□□ -0.46
FAM3BP58499 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
FAM3BP58499 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM3BP58499 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM3BP58499 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
FAM3BP58499 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
FAM3BP58499 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FAM3BP58499 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.16□□□□□ -0.46
FAM3BP58499 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 AC148477.5-201ENST00000625164 1645 ntBASIC12.16□□□□□ -0.46
FAM3BP58499 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM3BP58499 AC011477.6-201ENST00000604980 1927 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms