Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VSX2P58304 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VSX2P58304 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.85□□□□□ -0.03
VSX2P58304 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VSX2P58304 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 AC063926.2-201ENST00000623766 1308 ntBASIC14.85□□□□□ -0.03
VSX2P58304 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.85□□□□□ -0.03
VSX2P58304 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.85□□□□□ -0.03
VSX2P58304 AC105250.1-201ENST00000509378 2057 ntBASIC14.85□□□□□ -0.03
VSX2P58304 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VSX2P58304 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 CR383656.12-201ENST00000549567 513 ntBASIC14.84□□□□□ -0.03
VSX2P58304 AC120045.2-201ENST00000567334 178 ntBASIC14.84□□□□□ -0.03
VSX2P58304 AC132938.2-201ENST00000579188 680 ntBASIC14.84□□□□□ -0.03
VSX2P58304 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.84□□□□□ -0.03
VSX2P58304 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 AL591163.1-201ENST00000641757 987 ntBASIC14.84□□□□□ -0.03
VSX2P58304 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms