Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN2P57739 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN2P57739 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN2P57739 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.23■□□□□ 0.03
CLDN2P57739 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN2P57739 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.23■□□□□ 0.03
CLDN2P57739 AC008687.7-202ENST00000637404 953 ntBASIC15.23■□□□□ 0.03
CLDN2P57739 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CLDN2P57739 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CLDN2P57739 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLDN2P57739 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 FER1L4-210ENST00000615531 5998 ntBASIC15.22■□□□□ 0.03
CLDN2P57739 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN2P57739 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLDN2P57739 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 AC108725.1-201ENST00000495472 409 ntBASIC15.22■□□□□ 0.03
CLDN2P57739 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN2P57739 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.22■□□□□ 0.03
CLDN2P57739 MIR6869-201ENST00000619434 62 ntBASIC15.22■□□□□ 0.03
CLDN2P57739 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 AC007787.1-201ENST00000588095 1583 ntBASIC15.22■□□□□ 0.03
CLDN2P57739 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.22■□□□□ 0.03
CLDN2P57739 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 AC007950.2-201ENST00000615045 2347 ntBASIC15.22■□□□□ 0.03
CLDN2P57739 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CLDN2P57739 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLDN2P57739 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLDN2P57739 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.21■□□□□ 0.03
CLDN2P57739 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.21■□□□□ 0.03
CLDN2P57739 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLDN2P57739 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
CLDN2P57739 AC006001.1-201ENST00000325130 474 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms