Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 MIR661-201ENST00000384842 89 ntBASIC11.52□□□□□ -0.57
CMC4P56277 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 RN7SL752P-201ENST00000463779 287 ntBASIC11.52□□□□□ -0.57
CMC4P56277 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.52□□□□□ -0.57
CMC4P56277 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.52□□□□□ -0.57
CMC4P56277 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.52□□□□□ -0.57
CMC4P56277 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.52□□□□□ -0.57
CMC4P56277 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.52□□□□□ -0.57
CMC4P56277 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.52□□□□□ -0.57
CMC4P56277 AC008494.3-201ENST00000606615 944 ntBASIC11.52□□□□□ -0.57
CMC4P56277 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 AC025048.6-201ENST00000634326 1161 ntBASIC11.52□□□□□ -0.57
CMC4P56277 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 AL138799.1-201ENST00000448213 1675 ntBASIC11.52□□□□□ -0.57
CMC4P56277 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.52□□□□□ -0.57
CMC4P56277 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 PRAL-201ENST00000624952 3286 ntBASIC11.52□□□□□ -0.57
CMC4P56277 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.52□□□□□ -0.57
CMC4P56277 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.52□□□□□ -0.57
CMC4P56277 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CMC4P56277 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 AC008894.3-201ENST00000624324 3103 ntBASIC11.51□□□□□ -0.57
CMC4P56277 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 VDAC1P7-201ENST00000462417 847 ntBASIC11.51□□□□□ -0.57
CMC4P56277 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 KRT18P25-201ENST00000508931 1278 ntBASIC11.51□□□□□ -0.57
CMC4P56277 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 AP001063.1-201ENST00000568332 529 ntBASIC11.51□□□□□ -0.57
CMC4P56277 SAMD11P1-201ENST00000571429 661 ntBASIC11.51□□□□□ -0.57
CMC4P56277 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC11.51□□□□□ -0.57
CMC4P56277 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 WASH3P-207ENST00000560956 1394 ntBASIC11.51□□□□□ -0.57
CMC4P56277 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CMC4P56277 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.51□□□□□ -0.57
CMC4P56277 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.51□□□□□ -0.57
CMC4P56277 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CMC4P56277 AC126365.1-201ENST00000578585 1514 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms