Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.02■□□□□ 0.32
LBX1P52954 DUX4L47-201ENST00000566374 394 ntBASIC17.02■□□□□ 0.32
LBX1P52954 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 HCG18-241ENST00000602290 821 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LBX1P52954 AC008825.2-201ENST00000603374 718 ntBASIC17.02■□□□□ 0.32
LBX1P52954 AC010976.2-201ENST00000609697 852 ntBASIC17.02■□□□□ 0.32
LBX1P52954 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 AL450487.2-201ENST00000615934 407 ntBASIC17.02■□□□□ 0.32
LBX1P52954 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.02■□□□□ 0.32
LBX1P52954 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC17.02■□□□□ 0.32
LBX1P52954 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LBX1P52954 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.02■□□□□ 0.32
LBX1P52954 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.02■□□□□ 0.31
LBX1P52954 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.02■□□□□ 0.31
LBX1P52954 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.31
LBX1P52954 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 AC098818.2-201ENST00000564925 2320 ntBASIC17.02■□□□□ 0.31
LBX1P52954 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LBX1P52954 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LBX1P52954 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.01■□□□□ 0.31
LBX1P52954 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LBX1P52954 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.01■□□□□ 0.31
LBX1P52954 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LBX1P52954 FAU-201ENST00000279259 461 ntTSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 RNA5SP359-201ENST00000364838 113 ntBASIC17.01■□□□□ 0.31
LBX1P52954 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 AC108734.2-201ENST00000420887 1069 ntBASIC17.01■□□□□ 0.31
LBX1P52954 AC006122.1-201ENST00000493323 440 ntBASIC17.01■□□□□ 0.31
LBX1P52954 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC17.01■□□□□ 0.31
LBX1P52954 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC17.01■□□□□ 0.31
LBX1P52954 AC068867.1-201ENST00000559855 150 ntBASIC17.01■□□□□ 0.31
LBX1P52954 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.01■□□□□ 0.31
LBX1P52954 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC17.01■□□□□ 0.31
LBX1P52954 AC090510.3-201ENST00000615831 821 ntBASIC17.01■□□□□ 0.31
LBX1P52954 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LBX1P52954 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LBX1P52954 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LBX1P52954 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LBX1P52954 AC144522.1-201ENST00000625111 1658 ntBASIC17.01■□□□□ 0.31
LBX1P52954 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LBX1P52954 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LBX1P52954 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 SIGLEC20P-201ENST00000595243 1311 ntBASIC17■□□□□ 0.31
LBX1P52954 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17■□□□□ 0.31
LBX1P52954 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17■□□□□ 0.31
LBX1P52954 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
LBX1P52954 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 AC106827.1-201ENST00000366454 431 ntBASIC17■□□□□ 0.31
LBX1P52954 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17■□□□□ 0.31
LBX1P52954 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17■□□□□ 0.31
LBX1P52954 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17■□□□□ 0.31
LBX1P52954 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC17■□□□□ 0.31
LBX1P52954 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LBX1P52954 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17■□□□□ 0.31
LBX1P52954 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17■□□□□ 0.31
LBX1P52954 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17■□□□□ 0.31
LBX1P52954 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17■□□□□ 0.31
LBX1P52954 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LBX1P52954 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.99■□□□□ 0.31
LBX1P52954 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LBX1P52954 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LBX1P52954 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms