Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC124283.3-201ENST00000570869 594 ntBASIC15.37■□□□□ 0.05
ZNF140P52738 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.37■□□□□ 0.05
ZNF140P52738 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.37■□□□□ 0.05
ZNF140P52738 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF140P52738 AC007431.3-201ENST00000623221 587 ntBASIC15.37■□□□□ 0.05
ZNF140P52738 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF140P52738 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.37■□□□□ 0.05
ZNF140P52738 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF140P52738 AL138799.1-201ENST00000448213 1675 ntBASIC15.37■□□□□ 0.05
ZNF140P52738 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF140P52738 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ZNF140P52738 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.37■□□□□ 0.05
ZNF140P52738 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ZNF140P52738 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ZNF140P52738 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ZNF140P52738 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 PIN1P1-201ENST00000412108 996 ntBASIC15.36■□□□□ 0.05
ZNF140P52738 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF140P52738 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF140P52738 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 AC190387.1-201ENST00000551683 408 ntBASIC15.36■□□□□ 0.05
ZNF140P52738 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF140P52738 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.36■□□□□ 0.05
ZNF140P52738 AC093813.1-201ENST00000605066 256 ntBASIC15.36■□□□□ 0.05
ZNF140P52738 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.36■□□□□ 0.05
ZNF140P52738 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF140P52738 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 ACE3P-201ENST00000423435 1973 ntBASIC15.36■□□□□ 0.05
ZNF140P52738 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
ZNF140P52738 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF140P52738 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ZNF140P52738 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF140P52738 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF140P52738 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF140P52738 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 AC134915.1-201ENST00000426461 574 ntBASIC15.35■□□□□ 0.05
ZNF140P52738 MYCLP2-201ENST00000449268 967 ntBASIC15.35■□□□□ 0.05
ZNF140P52738 ELK1P1-201ENST00000485699 580 ntBASIC15.35■□□□□ 0.05
ZNF140P52738 TERF1P3-201ENST00000505638 1227 ntBASIC15.35■□□□□ 0.05
ZNF140P52738 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZNF140P52738 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF140P52738 TMEM261P1-201ENST00000604899 340 ntBASIC15.35■□□□□ 0.05
ZNF140P52738 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
ZNF140P52738 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF140P52738 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF140P52738 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF140P52738 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF140P52738 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF140P52738 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
ZNF140P52738 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms