Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC148477.4-201ENST00000613430 1793 ntBASIC13.83□□□□□ -0.2
CSNK1A1P48729 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC126365.1-201ENST00000578585 1514 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 MEIS3P1-201ENST00000495167 958 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC004840.1-201ENST00000636359 365 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AC023157.3-201ENST00000619086 2088 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 KRT8P44-201ENST00000441609 1350 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CSNK1A1P48729 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AP002414.2-201ENST00000591780 3365 ntBASIC13.82□□□□□ -0.2
CSNK1A1P48729 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CSNK1A1P48729 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 MIR770-201ENST00000390219 98 ntBASIC13.81□□□□□ -0.2
CSNK1A1P48729 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 AC104794.3-201ENST00000566840 1248 ntBASIC13.81□□□□□ -0.2
CSNK1A1P48729 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 SRD5A3P1-201ENST00000603021 949 ntBASIC13.81□□□□□ -0.2
CSNK1A1P48729 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK1A1P48729 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK1A1P48729 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms