Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.23■□□□□ 0.19
SLC1A1P43005 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.23■□□□□ 0.19
SLC1A1P43005 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.22■□□□□ 0.19
SLC1A1P43005 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.22■□□□□ 0.19
SLC1A1P43005 AL596442.2-201ENST00000610240 980 ntBASIC16.22■□□□□ 0.19
SLC1A1P43005 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC1A1P43005 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC1A1P43005 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC1A1P43005 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SLC1A1P43005 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC1A1P43005 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 TSEN15P1-201ENST00000423257 515 ntBASIC16.21■□□□□ 0.19
SLC1A1P43005 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.21■□□□□ 0.19
SLC1A1P43005 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC1A1P43005 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC1A1P43005 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 AC025678.2-201ENST00000562061 970 ntBASIC16.21■□□□□ 0.19
SLC1A1P43005 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SLC1A1P43005 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 Z92544.3-201ENST00000624747 417 ntBASIC16.21■□□□□ 0.19
SLC1A1P43005 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC1A1P43005 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC1A1P43005 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A1P43005 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.21■□□□□ 0.18
SLC1A1P43005 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC1A1P43005 AC087499.5-201ENST00000452760 1342 ntBASIC16.2■□□□□ 0.18
SLC1A1P43005 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A1P43005 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms