Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.72■□□□□ 0.11
HADHAP40939 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.72■□□□□ 0.11
HADHAP40939 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.72■□□□□ 0.11
HADHAP40939 BASP1P1-201ENST00000430708 665 ntBASIC15.72■□□□□ 0.11
HADHAP40939 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.72■□□□□ 0.11
HADHAP40939 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.72■□□□□ 0.11
HADHAP40939 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.72■□□□□ 0.11
HADHAP40939 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 AL109936.8-201ENST00000641772 604 ntBASIC15.72■□□□□ 0.11
HADHAP40939 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.72■□□□□ 0.11
HADHAP40939 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 AGAP7P-201ENST00000582299 2062 ntBASIC15.72■□□□□ 0.11
HADHAP40939 AGAP14-201ENST00000624701 2060 ntBASIC15.72■□□□□ 0.11
HADHAP40939 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HADHAP40939 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HADHAP40939 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.71■□□□□ 0.11
HADHAP40939 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 OR2I1P-209ENST00000641730 5365 ntBASIC15.71■□□□□ 0.11
HADHAP40939 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.71■□□□□ 0.11
HADHAP40939 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.71■□□□□ 0.11
HADHAP40939 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HADHAP40939 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.71■□□□□ 0.11
HADHAP40939 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HADHAP40939 AC074338.1-201ENST00000416825 156 ntBASIC15.71■□□□□ 0.11
HADHAP40939 AC015922.1-201ENST00000421102 1152 ntBASIC15.71■□□□□ 0.11
HADHAP40939 TSSK5P-201ENST00000423978 907 ntBASIC15.71■□□□□ 0.11
HADHAP40939 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.71■□□□□ 0.11
HADHAP40939 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.71■□□□□ 0.11
HADHAP40939 AL512638.1-201ENST00000457493 794 ntBASIC15.71■□□□□ 0.11
HADHAP40939 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.71■□□□□ 0.11
HADHAP40939 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.71■□□□□ 0.11
HADHAP40939 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.71■□□□□ 0.11
HADHAP40939 AC092364.2-202ENST00000597012 1073 ntBASIC15.71■□□□□ 0.11
HADHAP40939 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.71■□□□□ 0.11
HADHAP40939 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HADHAP40939 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HADHAP40939 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
HADHAP40939 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HADHAP40939 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
HADHAP40939 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HADHAP40939 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.71■□□□□ 0.1
HADHAP40939 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HADHAP40939 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HADHAP40939 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HADHAP40939 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
HADHAP40939 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HADHAP40939 MROH4P-201ENST00000431302 1578 ntBASIC15.7■□□□□ 0.1
HADHAP40939 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HADHAP40939 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.7■□□□□ 0.1
HADHAP40939 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HADHAP40939 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms