Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RFC1P35251 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFC1P35251 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.36■□□□□ 0.21
RFC1P35251 FAM8A3P-201ENST00000427218 844 ntBASIC16.36■□□□□ 0.21
RFC1P35251 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.36■□□□□ 0.21
RFC1P35251 SPDYE18-201ENST00000510091 1050 ntBASIC16.36■□□□□ 0.21
RFC1P35251 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.36■□□□□ 0.21
RFC1P35251 AC092337.1-201ENST00000568699 1129 ntBASIC16.36■□□□□ 0.21
RFC1P35251 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.36■□□□□ 0.21
RFC1P35251 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RFC1P35251 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RFC1P35251 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.36■□□□□ 0.21
RFC1P35251 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AC138969.3-201ENST00000546612 1459 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AC138932.2-201ENST00000548268 1459 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AC126755.4-201ENST00000549796 1459 ntBASIC16.35■□□□□ 0.21
RFC1P35251 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RFC1P35251 AC006058.4-201ENST00000624016 1670 ntBASIC16.35■□□□□ 0.21
RFC1P35251 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFC1P35251 AL589987.1-201ENST00000453380 819 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AL512638.1-201ENST00000457493 794 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 CYMP-203ENST00000474680 1263 ntBASIC16.35■□□□□ 0.21
RFC1P35251 AC093214.1-201ENST00000511688 1107 ntBASIC16.35■□□□□ 0.21
RFC1P35251 TIMM17BP1-201ENST00000545713 516 ntBASIC16.35■□□□□ 0.21
RFC1P35251 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RFC1P35251 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RFC1P35251 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RFC1P35251 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.35■□□□□ 0.21
RFC1P35251 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.34■□□□□ 0.21
RFC1P35251 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 TCAF2P1-201ENST00000291129 2421 ntBASIC16.34■□□□□ 0.21
RFC1P35251 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RFC1P35251 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
RFC1P35251 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.34■□□□□ 0.21
RFC1P35251 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.34■□□□□ 0.21
RFC1P35251 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.34■□□□□ 0.21
RFC1P35251 KRT18P43-201ENST00000469825 1281 ntBASIC16.34■□□□□ 0.21
RFC1P35251 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms