Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SLC6A4P31645 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SLC6A4P31645 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A4P31645 MIR658-201ENST00000385210 100 ntBASIC15.82■□□□□ 0.12
SLC6A4P31645 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 TMBIM7P-203ENST00000641617 1718 ntBASIC15.82■□□□□ 0.12
SLC6A4P31645 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC6A4P31645 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SLC6A4P31645 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC6A4P31645 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC6A4P31645 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A4P31645 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC6A4P31645 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC6A4P31645 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC6A4P31645 KRT8P35-201ENST00000483942 1338 ntBASIC15.81■□□□□ 0.12
SLC6A4P31645 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC6A4P31645 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SLC6A4P31645 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC6A4P31645 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC6A4P31645 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC6A4P31645 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 AL359258.3-201ENST00000622910 2331 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SLC6A4P31645 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC6A4P31645 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 ACTBP8-201ENST00000403258 1108 ntBASIC15.8■□□□□ 0.12
SLC6A4P31645 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SLC6A4P31645 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.8■□□□□ 0.12
SLC6A4P31645 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC6A4P31645 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms