Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PTPN6P29350 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.73□□□□□ -0.05
PTPN6P29350 KRT8P12-202ENST00000472924 1397 ntBASIC14.73□□□□□ -0.05
PTPN6P29350 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 REXO1L2P-201ENST00000425429 2069 ntBASIC14.72□□□□□ -0.05
PTPN6P29350 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PTPN6P29350 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 FAM8A3P-201ENST00000427218 844 ntBASIC14.72□□□□□ -0.05
PTPN6P29350 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.72□□□□□ -0.05
PTPN6P29350 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.72□□□□□ -0.05
PTPN6P29350 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 AC027369.6-201ENST00000525520 931 ntBASIC14.72□□□□□ -0.05
PTPN6P29350 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.72□□□□□ -0.05
PTPN6P29350 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 AC011467.4-201ENST00000594891 528 ntBASIC14.72□□□□□ -0.05
PTPN6P29350 AL138828.2-201ENST00000615812 383 ntBASIC14.72□□□□□ -0.05
PTPN6P29350 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.72□□□□□ -0.05
PTPN6P29350 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PTPN6P29350 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PTPN6P29350 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 CETN4P-206ENST00000642099 2168 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.71□□□□□ -0.05
PTPN6P29350 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 BASP1P1-201ENST00000430708 665 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PTPN6P29350 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.71□□□□□ -0.05
PTPN6P29350 SPCS2P1-201ENST00000561636 679 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.71□□□□□ -0.05
PTPN6P29350 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.71□□□□□ -0.05
PTPN6P29350 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.71□□□□□ -0.05
PTPN6P29350 AL589739.1-201ENST00000607720 493 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 AL390754.1-201ENST00000619088 582 ntBASIC14.71□□□□□ -0.05
PTPN6P29350 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.71□□□□□ -0.05
PTPN6P29350 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PTPN6P29350 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PTPN6P29350 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms