Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 AC105233.6-201ENST00000642093 218 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.27□□□□□ -0.13
ABCD3P28288 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.27□□□□□ -0.13
ABCD3P28288 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ABCD3P28288 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.27□□□□□ -0.13
ABCD3P28288 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCD3P28288 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCD3P28288 AC073347.1-201ENST00000421633 2643 ntBASIC14.27□□□□□ -0.13
ABCD3P28288 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.27□□□□□ -0.13
ABCD3P28288 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ABCD3P28288 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.26□□□□□ -0.13
ABCD3P28288 C1QBPP1-201ENST00000400117 770 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 SOCS2P1-201ENST00000417727 557 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.26□□□□□ -0.13
ABCD3P28288 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 AL596325.1-201ENST00000563991 1082 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 AC124283.3-201ENST00000570869 594 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 AL645728.2-202ENST00000641679 227 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 CICP11-201ENST00000434745 2827 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCD3P28288 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ABCD3P28288 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ABCD3P28288 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ABCD3P28288 AC068587.6-202ENST00000641839 5619 ntBASIC14.26□□□□□ -0.13
ABCD3P28288 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ABCD3P28288 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
ABCD3P28288 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 AC022532.1-201ENST00000624563 1728 ntBASIC14.25□□□□□ -0.13
ABCD3P28288 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.25□□□□□ -0.13
ABCD3P28288 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.25□□□□□ -0.13
ABCD3P28288 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
ABCD3P28288 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.25□□□□□ -0.13
ABCD3P28288 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ABCD3P28288 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.25□□□□□ -0.13
ABCD3P28288 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.25□□□□□ -0.13
ABCD3P28288 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms