Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 AC073869.1-201ENST00000415574 2762 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 AC027601.5-201ENST00000624065 2482 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.17□□□□□ -0.3
VAMP1P23763 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 HMGA1P7-201ENST00000406908 502 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 FAM8A3P-201ENST00000427218 844 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 KRT18P34-201ENST00000488218 1270 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 FAM86EP-206ENST00000510506 987 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.17□□□□□ -0.3
VAMP1P23763 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.17□□□□□ -0.3
VAMP1P23763 MIR4313-201ENST00000580760 101 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 AL732292.2-201ENST00000609649 430 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 AC116407.4-201ENST00000623319 1061 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 AL589702.1-201ENST00000641229 1509 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.17□□□□□ -0.3
VAMP1P23763 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.17□□□□□ -0.3
VAMP1P23763 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.17□□□□□ -0.3
VAMP1P23763 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VAMP1P23763 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
VAMP1P23763 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VAMP1P23763 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.16□□□□□ -0.3
VAMP1P23763 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 LAGE3P1-201ENST00000425356 484 ntBASIC13.16□□□□□ -0.3
VAMP1P23763 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 MIR3180-1-201ENST00000580374 94 ntBASIC13.16□□□□□ -0.3
VAMP1P23763 MIR3180-3-201ENST00000584616 94 ntBASIC13.16□□□□□ -0.3
VAMP1P23763 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.16□□□□□ -0.3
VAMP1P23763 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
VAMP1P23763 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.16□□□□□ -0.3
VAMP1P23763 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.16□□□□□ -0.3
VAMP1P23763 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VAMP1P23763 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms