Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.31□□□□□ -0.28
TNFSF4P23510 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TNFSF4P23510 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AC015910.1-201ENST00000579400 975 ntBASIC13.3□□□□□ -0.28
TNFSF4P23510 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TNFSF4P23510 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 AL158212.4-201ENST00000624062 1286 ntBASIC13.3□□□□□ -0.28
TNFSF4P23510 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TNFSF4P23510 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TNFSF4P23510 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TNFSF4P23510 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TNFSF4P23510 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.3□□□□□ -0.28
TNFSF4P23510 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TNFSF4P23510 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TNFSF4P23510 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 AL121723.1-201ENST00000445194 1519 ntBASIC13.29□□□□□ -0.28
TNFSF4P23510 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.29□□□□□ -0.28
TNFSF4P23510 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TNFSF4P23510 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.29□□□□□ -0.28
TNFSF4P23510 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 KRT18P64-201ENST00000434946 1219 ntBASIC13.29□□□□□ -0.28
TNFSF4P23510 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 CRB3P1-201ENST00000449338 276 ntBASIC13.29□□□□□ -0.28
TNFSF4P23510 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 AL589987.1-201ENST00000453380 819 ntBASIC13.29□□□□□ -0.28
TNFSF4P23510 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.29□□□□□ -0.28
TNFSF4P23510 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.29□□□□□ -0.28
TNFSF4P23510 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.29□□□□□ -0.28
TNFSF4P23510 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TNFSF4P23510 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TNFSF4P23510 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TNFSF4P23510 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TNFSF4P23510 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.28□□□□□ -0.28
TNFSF4P23510 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms