Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH3P22223 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH3P22223 TARDBPP1-201ENST00000442013 1203 ntBASIC15.27■□□□□ 0.04
CDH3P22223 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH3P22223 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH3P22223 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH3P22223 AC055876.2-201ENST00000531834 546 ntBASIC15.27■□□□□ 0.04
CDH3P22223 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH3P22223 AC025048.6-201ENST00000634326 1161 ntBASIC15.27■□□□□ 0.04
CDH3P22223 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH3P22223 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH3P22223 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CDH3P22223 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDH3P22223 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH3P22223 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH3P22223 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH3P22223 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.26■□□□□ 0.03
CDH3P22223 MEIS3P1-201ENST00000495167 958 ntBASIC15.26■□□□□ 0.03
CDH3P22223 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH3P22223 API5-211ENST00000534695 560 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 AC023310.3-201ENST00000557027 670 ntBASIC15.26■□□□□ 0.03
CDH3P22223 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CDH3P22223 AC100756.1-201ENST00000562736 682 ntBASIC15.26■□□□□ 0.03
CDH3P22223 AC138749.3-201ENST00000567691 622 ntBASIC15.26■□□□□ 0.03
CDH3P22223 AC092337.1-201ENST00000568699 1129 ntBASIC15.26■□□□□ 0.03
CDH3P22223 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 LINC01115-203ENST00000606068 577 ntBASIC15.26■□□□□ 0.03
CDH3P22223 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.26■□□□□ 0.03
CDH3P22223 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 AC116165.1-201ENST00000611806 668 ntBASIC15.26■□□□□ 0.03
CDH3P22223 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDH3P22223 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.26■□□□□ 0.03
CDH3P22223 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDH3P22223 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDH3P22223 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.26■□□□□ 0.03
CDH3P22223 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 SLC7A15P-201ENST00000424028 1363 ntBASIC15.25■□□□□ 0.03
CDH3P22223 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.25■□□□□ 0.03
CDH3P22223 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDH3P22223 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.25■□□□□ 0.03
CDH3P22223 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.25■□□□□ 0.03
CDH3P22223 AP005018.1-201ENST00000525475 301 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms