Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.65□□□□□ -0.22
ATF1P18846 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.65□□□□□ -0.22
ATF1P18846 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 AC015656.1-201ENST00000624209 3578 ntBASIC13.65□□□□□ -0.22
ATF1P18846 AL365209.1-201ENST00000624418 6473 ntBASIC13.65□□□□□ -0.22
ATF1P18846 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.65□□□□□ -0.22
ATF1P18846 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 AC097359.2-201ENST00000604992 2389 ntBASIC13.65□□□□□ -0.22
ATF1P18846 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.65□□□□□ -0.22
ATF1P18846 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATF1P18846 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATF1P18846 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 UXT-AS1-201ENST00000590504 1525 ntBASIC13.64□□□□□ -0.23
ATF1P18846 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
ATF1P18846 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 AP3S2-216ENST00000617003 1561 ntBASIC13.64□□□□□ -0.23
ATF1P18846 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 MIR940-201ENST00000401276 94 ntBASIC13.64□□□□□ -0.23
ATF1P18846 EEF1DP4-201ENST00000446006 880 ntBASIC13.64□□□□□ -0.23
ATF1P18846 ACTG1P14-201ENST00000446382 1122 ntBASIC13.64□□□□□ -0.23
ATF1P18846 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.64□□□□□ -0.23
ATF1P18846 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.64□□□□□ -0.23
ATF1P18846 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.64□□□□□ -0.23
ATF1P18846 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.64□□□□□ -0.23
ATF1P18846 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.64□□□□□ -0.23
ATF1P18846 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ATF1P18846 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 HSPA7-201ENST00000445535 1927 ntBASIC13.64□□□□□ -0.23
ATF1P18846 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.64□□□□□ -0.23
ATF1P18846 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATF1P18846 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ATF1P18846 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ATF1P18846 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.63□□□□□ -0.23
ATF1P18846 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms