Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXD8P13378 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXD8P13378 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXD8P13378 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXD8P13378 AL021578.1-201ENST00000613646 709 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 AL023803.2-201ENST00000620080 638 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXD8P13378 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXD8P13378 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HOXD8P13378 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXD8P13378 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXD8P13378 AL139384.1-201ENST00000612143 3047 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HOXD8P13378 AL137783.1-201ENST00000623494 1896 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 AP003680.1-201ENST00000598970 3660 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXD8P13378 LINC02199-201ENST00000506655 2702 ntBASIC16.82■□□□□ 0.28
HOXD8P13378 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.81■□□□□ 0.28
HOXD8P13378 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXD8P13378 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXD8P13378 MIR4683-201ENST00000579659 81 ntBASIC16.81■□□□□ 0.28
HOXD8P13378 NDUFV2P1-201ENST00000596415 907 ntBASIC16.81■□□□□ 0.28
HOXD8P13378 AC009955.4-201ENST00000597192 544 ntBASIC16.81■□□□□ 0.28
HOXD8P13378 AC138649.2-201ENST00000615886 705 ntBASIC16.81■□□□□ 0.28
HOXD8P13378 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.81■□□□□ 0.28
HOXD8P13378 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.81■□□□□ 0.28
HOXD8P13378 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HOXD8P13378 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HOXD8P13378 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.81■□□□□ 0.28
HOXD8P13378 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HOXD8P13378 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HOXD8P13378 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 KRT8P29-201ENST00000420409 1371 ntBASIC16.8■□□□□ 0.28
HOXD8P13378 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HOXD8P13378 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXD8P13378 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HOXD8P13378 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.8■□□□□ 0.28
HOXD8P13378 RN7SKP230-201ENST00000365642 335 ntBASIC16.8■□□□□ 0.28
HOXD8P13378 DPM3-202ENST00000368399 517 ntBASIC16.8■□□□□ 0.28
HOXD8P13378 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HOXD8P13378 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 AC010141.1-201ENST00000411585 623 ntBASIC16.8■□□□□ 0.28
HOXD8P13378 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXD8P13378 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXD8P13378 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXD8P13378 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXD8P13378 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.8■□□□□ 0.28
HOXD8P13378 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms