Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
DEFA4P12838 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
DEFA4P12838 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.69□□□□□ -0.38
DEFA4P12838 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.68□□□□□ -0.38
DEFA4P12838 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.68□□□□□ -0.38
DEFA4P12838 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 GPX1P2-201ENST00000429271 606 ntBASIC12.68□□□□□ -0.38
DEFA4P12838 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.68□□□□□ -0.38
DEFA4P12838 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.68□□□□□ -0.38
DEFA4P12838 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.68□□□□□ -0.38
DEFA4P12838 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 AC243562.1-201ENST00000560672 389 ntBASIC12.68□□□□□ -0.38
DEFA4P12838 AC005829.1-201ENST00000570002 483 ntBASIC12.68□□□□□ -0.38
DEFA4P12838 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.68□□□□□ -0.38
DEFA4P12838 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.68□□□□□ -0.38
DEFA4P12838 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.68□□□□□ -0.38
DEFA4P12838 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
DEFA4P12838 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 AC005089.1-201ENST00000619486 2241 ntBASIC12.68□□□□□ -0.38
DEFA4P12838 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DEFA4P12838 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 LINC00528-201ENST00000600723 2160 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
DEFA4P12838 AC007191.1-201ENST00000623179 2995 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
DEFA4P12838 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
DEFA4P12838 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DEFA4P12838 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.67□□□□□ -0.38
DEFA4P12838 AC005237.2-201ENST00000434368 219 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 SPCS2P4-201ENST00000436160 681 ntBASIC12.67□□□□□ -0.38
DEFA4P12838 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms