Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RETP07949 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.62■□□□□ 0.09
RETP07949 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TMEM198B-204ENST00000484016 896 ntBASIC15.62■□□□□ 0.09
RETP07949 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RETP07949 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.62■□□□□ 0.09
RETP07949 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.62■□□□□ 0.09
RETP07949 MIR3619-201ENST00000579667 83 ntBASIC15.62■□□□□ 0.09
RETP07949 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.62■□□□□ 0.09
RETP07949 U62317.3-201ENST00000608319 855 ntBASIC15.62■□□□□ 0.09
RETP07949 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RETP07949 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RETP07949 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 LINC01144-201ENST00000626198 1710 ntBASIC15.62■□□□□ 0.09
RETP07949 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 AHCYP2-201ENST00000430630 1300 ntBASIC15.62■□□□□ 0.09
RETP07949 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RETP07949 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.62■□□□□ 0.09
RETP07949 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RETP07949 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RETP07949 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RETP07949 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.61■□□□□ 0.09
RETP07949 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 AL691432.1-201ENST00000596308 1422 ntBASIC15.61■□□□□ 0.09
RETP07949 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.61■□□□□ 0.09
RETP07949 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
RETP07949 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RETP07949 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.61■□□□□ 0.09
RETP07949 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.61■□□□□ 0.09
RETP07949 AC005622.1-201ENST00000636801 1703 ntBASIC15.61■□□□□ 0.09
RETP07949 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.61■□□□□ 0.09
RETP07949 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.61■□□□□ 0.09
RETP07949 MTX1P1-201ENST00000440904 838 ntBASIC15.61■□□□□ 0.09
RETP07949 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.61■□□□□ 0.09
RETP07949 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.61■□□□□ 0.09
RETP07949 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 AC243562.2-201ENST00000561247 970 ntBASIC15.61■□□□□ 0.09
RETP07949 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.61■□□□□ 0.09
RETP07949 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.61■□□□□ 0.09
RETP07949 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.61■□□□□ 0.09
RETP07949 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.61■□□□□ 0.09
RETP07949 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
RETP07949 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.61■□□□□ 0.09
RETP07949 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.61■□□□□ 0.09
RETP07949 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RETP07949 AC138627.1-207ENST00000641560 1006 ntBASIC15.61■□□□□ 0.09
RETP07949 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RETP07949 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.61■□□□□ 0.09
RETP07949 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
RETP07949 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.61■□□□□ 0.09
RETP07949 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RETP07949 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.6■□□□□ 0.09
RETP07949 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RETP07949 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RETP07949 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RETP07949 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RETP07949 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
RETP07949 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RETP07949 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.6■□□□□ 0.09
RETP07949 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.6■□□□□ 0.09
RETP07949 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.6■□□□□ 0.09
RETP07949 RPS2P36-201ENST00000456516 831 ntBASIC15.6■□□□□ 0.09
RETP07949 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.6■□□□□ 0.09
RETP07949 HIST2H2BC-201ENST00000498492 580 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms