Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.87■□□□□ 0.29
VTNP04004 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.87■□□□□ 0.29
VTNP04004 AC108725.1-201ENST00000495472 409 ntBASIC16.87■□□□□ 0.29
VTNP04004 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.87■□□□□ 0.29
VTNP04004 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VTNP04004 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.87■□□□□ 0.29
VTNP04004 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 MIR6869-201ENST00000619434 62 ntBASIC16.87■□□□□ 0.29
VTNP04004 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 AHCYP2-201ENST00000430630 1300 ntBASIC16.87■□□□□ 0.29
VTNP04004 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
VTNP04004 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
VTNP04004 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
VTNP04004 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 AC008741.2-201ENST00000612792 3115 ntBASIC16.87■□□□□ 0.29
VTNP04004 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.87■□□□□ 0.29
VTNP04004 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VTNP04004 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VTNP04004 AL645937.2-201ENST00000396808 931 ntBASIC16.86■□□□□ 0.29
VTNP04004 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.86■□□□□ 0.29
VTNP04004 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.86■□□□□ 0.29
VTNP04004 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 AL645728.2-202ENST00000641679 227 ntBASIC16.86■□□□□ 0.29
VTNP04004 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.86■□□□□ 0.29
VTNP04004 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 KRT8P14-201ENST00000414254 1442 ntBASIC16.86■□□□□ 0.29
VTNP04004 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VTNP04004 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.86■□□□□ 0.29
VTNP04004 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VTNP04004 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.85■□□□□ 0.29
VTNP04004 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VTNP04004 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms