Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RAPGEF3O95398 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RAPGEF3O95398 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RAPGEF3O95398 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
RAPGEF3O95398 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RAPGEF3O95398 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 DDX39AP1-201ENST00000445147 1181 ntBASIC22.61■■□□□ 1.21
RAPGEF3O95398 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 AC009560.1-201ENST00000620208 434 ntBASIC22.61■■□□□ 1.21
RAPGEF3O95398 PLS3-210ENST00000626746 216 ntTSL 4 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RAPGEF3O95398 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC22.61■■□□□ 1.21
RAPGEF3O95398 CEP83-AS1-201ENST00000623122 2482 ntBASIC22.6■■□□□ 1.21
RAPGEF3O95398 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 CYP4F23P-201ENST00000593402 1579 ntBASIC22.6■■□□□ 1.21
RAPGEF3O95398 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 ABR-203ENST00000536794 2213 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 MBP-201ENST00000354542 575 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 HCG27-204ENST00000424675 895 ntTSL 3 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC22.6■■□□□ 1.21
RAPGEF3O95398 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RAPGEF3O95398 AL360270.3-201ENST00000609118 1348 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 BANF1P3-201ENST00000412556 261 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 ACTBP7-201ENST00000418351 1124 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 DUTP3-201ENST00000450025 415 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 AC006122.1-201ENST00000493323 440 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 AC084752.1-201ENST00000509766 622 ntBASIC22.59■■□□□ 1.21
RAPGEF3O95398 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RAPGEF3O95398 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RAPGEF3O95398 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms