Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 DRD5P1-201ENST00000456605 1438 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.65■□□□□ 0.26
CSPG5O95196 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CSPG5O95196 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.65■□□□□ 0.26
CSPG5O95196 FNTAP2-201ENST00000430308 634 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.65■□□□□ 0.26
CSPG5O95196 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 AC022137.2-201ENST00000503482 481 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.65■□□□□ 0.26
CSPG5O95196 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.65■□□□□ 0.26
CSPG5O95196 DUX4L45-201ENST00000566406 1057 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 ECM1P1-201ENST00000604092 1279 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
CSPG5O95196 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.65■□□□□ 0.26
CSPG5O95196 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.65■□□□□ 0.26
CSPG5O95196 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CSPG5O95196 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CSPG5O95196 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CSPG5O95196 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CSPG5O95196 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.64■□□□□ 0.25
CSPG5O95196 MTX1P1-201ENST00000440904 838 ntBASIC16.64■□□□□ 0.25
CSPG5O95196 AC005077.2-201ENST00000449786 690 ntBASIC16.64■□□□□ 0.25
CSPG5O95196 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 AC079328.1-201ENST00000560358 952 ntBASIC16.64■□□□□ 0.25
CSPG5O95196 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.64■□□□□ 0.25
CSPG5O95196 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 AL008638.5-201ENST00000623814 1298 ntBASIC16.64■□□□□ 0.25
CSPG5O95196 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.64■□□□□ 0.25
CSPG5O95196 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CSPG5O95196 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.64■□□□□ 0.25
CSPG5O95196 AC068418.2-201ENST00000577309 3703 ntBASIC16.63■□□□□ 0.25
CSPG5O95196 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CSPG5O95196 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.63■□□□□ 0.25
CSPG5O95196 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms