Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.17□□□□□ -0.14
CLPXO76031 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.17□□□□□ -0.14
CLPXO76031 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.17□□□□□ -0.14
CLPXO76031 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.17□□□□□ -0.14
CLPXO76031 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 AC139887.3-201ENST00000568585 713 ntBASIC14.17□□□□□ -0.14
CLPXO76031 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.17□□□□□ -0.14
CLPXO76031 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.17□□□□□ -0.14
CLPXO76031 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.17□□□□□ -0.14
CLPXO76031 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CLPXO76031 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.17□□□□□ -0.14
CLPXO76031 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CLPXO76031 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.16□□□□□ -0.14
CLPXO76031 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLPXO76031 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 LAGE3P1-201ENST00000425356 484 ntBASIC14.16□□□□□ -0.14
CLPXO76031 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.16□□□□□ -0.14
CLPXO76031 AC021087.4-201ENST00000563761 564 ntBASIC14.16□□□□□ -0.14
CLPXO76031 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.16□□□□□ -0.14
CLPXO76031 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.16□□□□□ -0.14
CLPXO76031 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.16□□□□□ -0.14
CLPXO76031 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLPXO76031 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CLPXO76031 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.16□□□□□ -0.14
CLPXO76031 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLPXO76031 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.15□□□□□ -0.14
CLPXO76031 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.15□□□□□ -0.14
CLPXO76031 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 MTHFR-210ENST00000641407 2387 ntBASIC14.15□□□□□ -0.14
CLPXO76031 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CLPXO76031 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.15□□□□□ -0.14
CLPXO76031 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLPXO76031 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLPXO76031 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.15□□□□□ -0.14
CLPXO76031 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.15□□□□□ -0.14
CLPXO76031 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLPXO76031 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms