Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GPC4O75487 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
GPC4O75487 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC4O75487 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC4O75487 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 AC105250.1-201ENST00000509378 2057 ntBASIC15.6■□□□□ 0.09
GPC4O75487 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 MIR943-201ENST00000401286 94 ntBASIC15.6■□□□□ 0.09
GPC4O75487 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 SERBP1P3-201ENST00000459980 809 ntBASIC15.6■□□□□ 0.09
GPC4O75487 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.6■□□□□ 0.09
GPC4O75487 AC027369.6-201ENST00000525520 931 ntBASIC15.6■□□□□ 0.09
GPC4O75487 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
GPC4O75487 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.6■□□□□ 0.09
GPC4O75487 MIR6069-201ENST00000620069 79 ntBASIC15.6■□□□□ 0.09
GPC4O75487 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 AC090616.6-203ENST00000579186 1945 ntBASIC15.6■□□□□ 0.09
GPC4O75487 AC092127.1-201ENST00000567093 3455 ntBASIC15.6■□□□□ 0.09
GPC4O75487 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GPC4O75487 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC4O75487 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.6■□□□□ 0.09
GPC4O75487 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.59■□□□□ 0.09
GPC4O75487 AC055876.3-201ENST00000431496 288 ntBASIC15.59■□□□□ 0.09
GPC4O75487 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
GPC4O75487 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.59■□□□□ 0.09
GPC4O75487 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.59■□□□□ 0.09
GPC4O75487 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GPC4O75487 AC138649.4-201ENST00000612222 287 ntBASIC15.59■□□□□ 0.09
GPC4O75487 AC093512.1-201ENST00000617969 520 ntBASIC15.59■□□□□ 0.09
GPC4O75487 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 AL590560.3-201ENST00000623350 461 ntBASIC15.59■□□□□ 0.09
GPC4O75487 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.59■□□□□ 0.09
GPC4O75487 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
GPC4O75487 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms