Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.52□□□□□ -0.08
TRIM3O75382 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRIM3O75382 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.52□□□□□ -0.08
TRIM3O75382 AC023908.3-201ENST00000564211 3047 ntBASIC14.52□□□□□ -0.08
TRIM3O75382 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 SPDYE18-201ENST00000510091 1050 ntBASIC14.52□□□□□ -0.09
TRIM3O75382 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM3O75382 AC104794.3-201ENST00000566840 1248 ntBASIC14.52□□□□□ -0.09
TRIM3O75382 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
TRIM3O75382 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.52□□□□□ -0.09
TRIM3O75382 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 AC004233.3-201ENST00000607794 1269 ntBASIC14.52□□□□□ -0.09
TRIM3O75382 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 REXO1L1P-202ENST00000608646 1974 ntBASIC14.52□□□□□ -0.09
TRIM3O75382 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRIM3O75382 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRIM3O75382 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRIM3O75382 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.52□□□□□ -0.09
TRIM3O75382 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 SNX18-202ENST00000343017 3140 ntBASIC14.51□□□□□ -0.09
TRIM3O75382 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRIM3O75382 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 PIN1P1-201ENST00000412108 996 ntBASIC14.51□□□□□ -0.09
TRIM3O75382 PHKG1P2-201ENST00000457537 863 ntBASIC14.51□□□□□ -0.09
TRIM3O75382 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.51□□□□□ -0.09
TRIM3O75382 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRIM3O75382 SRD5A3P1-201ENST00000603021 949 ntBASIC14.51□□□□□ -0.09
TRIM3O75382 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TRIM3O75382 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.51□□□□□ -0.09
TRIM3O75382 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRIM3O75382 AC011477.6-201ENST00000604980 1927 ntBASIC14.51□□□□□ -0.09
TRIM3O75382 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRIM3O75382 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRIM3O75382 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.5□□□□□ -0.09
TRIM3O75382 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms