Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ZIC3O60481 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ZIC3O60481 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.88□□□□□ -0.19
ZIC3O60481 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ZIC3O60481 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
ZIC3O60481 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 AC022532.1-201ENST00000624563 1728 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 AC018665.1-201ENST00000622927 1362 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 RNU1-114P-201ENST00000365297 166 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 AC092933.1-201ENST00000393644 945 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 BCRP2-202ENST00000447763 634 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 BCRP6-201ENST00000510112 632 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 BCRP7-201ENST00000511549 544 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.87□□□□□ -0.19
ZIC3O60481 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
ZIC3O60481 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ZIC3O60481 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ZIC3O60481 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.87□□□□□ -0.19
ZIC3O60481 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ZIC3O60481 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 CICP6-201ENST00000457191 2729 ntBASIC13.86□□□□□ -0.19
ZIC3O60481 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 AC148477.4-201ENST00000613430 1793 ntBASIC13.86□□□□□ -0.19
ZIC3O60481 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ZIC3O60481 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ZIC3O60481 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ZIC3O60481 KLF2P2-201ENST00000416807 1039 ntBASIC13.86□□□□□ -0.19
ZIC3O60481 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.86□□□□□ -0.19
ZIC3O60481 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms