Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.21■□□□□ 0.02
DLX3O60479 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
DLX3O60479 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
DLX3O60479 PCDHA3-202ENST00000532566 4594 ntBASIC15.21■□□□□ 0.02
DLX3O60479 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.2■□□□□ 0.02
DLX3O60479 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DLX3O60479 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
DLX3O60479 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 KRT18P13-201ENST00000400056 1290 ntBASIC15.2■□□□□ 0.02
DLX3O60479 AL080243.2-201ENST00000418783 582 ntBASIC15.2■□□□□ 0.02
DLX3O60479 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.2■□□□□ 0.02
DLX3O60479 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.2■□□□□ 0.02
DLX3O60479 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.2■□□□□ 0.02
DLX3O60479 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.2■□□□□ 0.02
DLX3O60479 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.2■□□□□ 0.02
DLX3O60479 AC025048.3-201ENST00000590609 569 ntBASIC15.2■□□□□ 0.02
DLX3O60479 AL589739.1-201ENST00000607720 493 ntBASIC15.2■□□□□ 0.02
DLX3O60479 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 MIR6080-201ENST00000617359 66 ntBASIC15.2■□□□□ 0.02
DLX3O60479 AC005702.4-201ENST00000618393 416 ntBASIC15.2■□□□□ 0.02
DLX3O60479 MIR6069-201ENST00000620069 79 ntBASIC15.2■□□□□ 0.02
DLX3O60479 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.2■□□□□ 0.02
DLX3O60479 LINC00628-201ENST00000628516 1289 ntBASIC15.2■□□□□ 0.02
DLX3O60479 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
DLX3O60479 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
DLX3O60479 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.2■□□□□ 0.02
DLX3O60479 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DLX3O60479 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.2■□□□□ 0.02
DLX3O60479 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DLX3O60479 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
DLX3O60479 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
DLX3O60479 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.19■□□□□ 0.02
DLX3O60479 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.19■□□□□ 0.02
DLX3O60479 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
DLX3O60479 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.19■□□□□ 0.02
DLX3O60479 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.19■□□□□ 0.02
DLX3O60479 MTHFR-210ENST00000641407 2387 ntBASIC15.19■□□□□ 0.02
DLX3O60479 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.19■□□□□ 0.02
DLX3O60479 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 AL133267.1-201ENST00000398220 340 ntBASIC15.19■□□□□ 0.02
DLX3O60479 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
DLX3O60479 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.19■□□□□ 0.02
DLX3O60479 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.19■□□□□ 0.02
DLX3O60479 AC025181.2-201ENST00000606994 802 ntBASIC15.19■□□□□ 0.02
DLX3O60479 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms