Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.7□□□□□ -0.38
SSSCA1O60232 TSPY19P-201ENST00000418461 509 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 TSPY18P-201ENST00000441642 509 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 RNPS1P1-201ENST00000507437 918 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.7□□□□□ -0.38
SSSCA1O60232 AC024267.1-201ENST00000582320 895 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.7□□□□□ -0.38
SSSCA1O60232 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SSSCA1O60232 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSSCA1O60232 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 CICP11-201ENST00000434745 2827 ntBASIC12.7□□□□□ -0.38
SSSCA1O60232 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.7□□□□□ -0.38
SSSCA1O60232 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.69□□□□□ -0.38
SSSCA1O60232 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 AC097359.2-201ENST00000604992 2389 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SSSCA1O60232 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.69□□□□□ -0.38
SSSCA1O60232 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
SSSCA1O60232 AC108751.1-201ENST00000490852 363 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.69□□□□□ -0.38
SSSCA1O60232 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 AC012640.2-201ENST00000561606 901 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 AC117500.6-201ENST00000624871 588 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.69□□□□□ -0.38
SSSCA1O60232 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PEG13-201ENST00000631594 5667 ntBASIC12.69□□□□□ -0.38
SSSCA1O60232 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.69□□□□□ -0.38
SSSCA1O60232 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSSCA1O60232 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SSSCA1O60232 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms