Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.39■□□□□ 0.37
ACTN4O43707 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.38■□□□□ 0.37
ACTN4O43707 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 AC097493.3-201ENST00000509725 367 ntBASIC17.38■□□□□ 0.37
ACTN4O43707 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ACTN4O43707 AC004449.1-201ENST00000564240 433 ntBASIC17.38■□□□□ 0.37
ACTN4O43707 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
ACTN4O43707 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 AC023511.2-201ENST00000618803 211 ntBASIC17.38■□□□□ 0.37
ACTN4O43707 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ACTN4O43707 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 AL359258.3-201ENST00000622910 2331 ntBASIC17.38■□□□□ 0.37
ACTN4O43707 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.38■□□□□ 0.37
ACTN4O43707 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.38■□□□□ 0.37
ACTN4O43707 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ACTN4O43707 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACTN4O43707 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.37■□□□□ 0.37
ACTN4O43707 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 AC138969.3-201ENST00000546612 1459 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 AC138932.2-201ENST00000548268 1459 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 AC126755.4-201ENST00000549796 1459 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.37■□□□□ 0.37
ACTN4O43707 FAM8A3P-201ENST00000427218 844 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ACTN4O43707 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.37■□□□□ 0.37
ACTN4O43707 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.37■□□□□ 0.37
ACTN4O43707 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.37■□□□□ 0.37
ACTN4O43707 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 AC000095.1-201ENST00000603208 874 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 AL158211.3-201ENST00000607385 239 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.37■□□□□ 0.37
ACTN4O43707 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.37■□□□□ 0.37
ACTN4O43707 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 AC100757.3-201ENST00000622361 1406 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 AC067930.6-201ENST00000623257 4947 ntBASIC17.37■□□□□ 0.37
ACTN4O43707 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACTN4O43707 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ACTN4O43707 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ACTN4O43707 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACTN4O43707 CICP14-201ENST00000629111 2732 ntBASIC17.36■□□□□ 0.37
ACTN4O43707 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms