Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SGCEO43556 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.8□□□□□ -0.2
SGCEO43556 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 AL645939.2-201ENST00000427340 991 ntBASIC13.79□□□□□ -0.2
SGCEO43556 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 TARDBPP1-201ENST00000442013 1203 ntBASIC13.79□□□□□ -0.2
SGCEO43556 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.79□□□□□ -0.2
SGCEO43556 TEX28P1-201ENST00000613479 1221 ntBASIC13.79□□□□□ -0.2
SGCEO43556 TEX28P2-201ENST00000617764 1221 ntBASIC13.79□□□□□ -0.2
SGCEO43556 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 AC126335.2-201ENST00000623362 4637 ntBASIC13.79□□□□□ -0.2
SGCEO43556 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.79□□□□□ -0.2
SGCEO43556 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SGCEO43556 AC009090.5-201ENST00000624886 2285 ntBASIC13.79□□□□□ -0.2
SGCEO43556 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
SGCEO43556 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.79□□□□□ -0.2
SGCEO43556 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 AC097376.2-205ENST00000610159 5334 ntBASIC13.78□□□□□ -0.2
SGCEO43556 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.78□□□□□ -0.2
SGCEO43556 RN7SL618P-201ENST00000477850 296 ntBASIC13.78□□□□□ -0.2
SGCEO43556 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.78□□□□□ -0.2
SGCEO43556 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.78□□□□□ -0.2
SGCEO43556 AC027369.6-201ENST00000525520 931 ntBASIC13.78□□□□□ -0.2
SGCEO43556 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.78□□□□□ -0.2
SGCEO43556 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.78□□□□□ -0.2
SGCEO43556 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.78□□□□□ -0.2
SGCEO43556 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.78□□□□□ -0.2
SGCEO43556 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SGCEO43556 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SGCEO43556 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.78□□□□□ -0.2
SGCEO43556 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms