Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DDX39AO00148 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.39■□□□□ 0.38
DDX39AO00148 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
DDX39AO00148 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DDX39AO00148 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
DDX39AO00148 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DDX39AO00148 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX39AO00148 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DDX39AO00148 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX39AO00148 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX39AO00148 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX39AO00148 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DDX39AO00148 AC106760.1-201ENST00000508690 800 ntBASIC17.39■□□□□ 0.37
DDX39AO00148 AP001889.1-201ENST00000525414 633 ntBASIC17.39■□□□□ 0.37
DDX39AO00148 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX39AO00148 SNX29P1-201ENST00000548357 1007 ntBASIC17.39■□□□□ 0.37
DDX39AO00148 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.39■□□□□ 0.37
DDX39AO00148 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.39■□□□□ 0.37
DDX39AO00148 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DDX39AO00148 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.39■□□□□ 0.37
DDX39AO00148 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DDX39AO00148 CICP11-201ENST00000434745 2827 ntBASIC17.39■□□□□ 0.37
DDX39AO00148 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX39AO00148 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.38■□□□□ 0.37
DDX39AO00148 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
DDX39AO00148 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DDX39AO00148 MIR658-201ENST00000385210 100 ntBASIC17.38■□□□□ 0.37
DDX39AO00148 BAATP1-201ENST00000412284 1225 ntBASIC17.38■□□□□ 0.37
DDX39AO00148 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX39AO00148 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX39AO00148 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DDX39AO00148 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.38■□□□□ 0.37
DDX39AO00148 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.38■□□□□ 0.37
DDX39AO00148 AC009486.1-201ENST00000569860 813 ntBASIC17.38■□□□□ 0.37
DDX39AO00148 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 AC136621.1-201ENST00000624017 2304 ntBASIC17.38■□□□□ 0.37
DDX39AO00148 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DDX39AO00148 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
DDX39AO00148 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DDX39AO00148 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
DDX39AO00148 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DDX39AO00148 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.37■□□□□ 0.37
DDX39AO00148 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
DDX39AO00148 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.37■□□□□ 0.37
DDX39AO00148 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DDX39AO00148 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DDX39AO00148 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms