Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 MTHFR-210ENST00000641407 2387 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC006504.5-208ENST00000588784 2401 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC002056.1-201ENST00000395613 760 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 RPL5P21-201ENST00000404620 815 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC079781.3-201ENST00000449110 356 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 AC097359.2-201ENST00000604992 2389 ntBASIC13.29□□□□□ -0.28
TMEM235A6NFC5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM235A6NFC5 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AL607033.1-201ENST00000623900 1599 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AL139010.1-201ENST00000454878 894 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 RARRES2P8-201ENST00000566335 367 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AC099522.2-201ENST00000607001 744 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AL031008.1-201ENST00000619963 541 ntBASIC13.28□□□□□ -0.28
TMEM235A6NFC5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM235A6NFC5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms