Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 DBET-201ENST00000630918 3363 ntBASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AC098850.1-201ENST00000419919 790 ntBASIC14.71□□□□□ -0.05
LRIT2A6NDA9 VDAC1P7-201ENST00000462417 847 ntBASIC14.71□□□□□ -0.05
LRIT2A6NDA9 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 AC092552.1-201ENST00000547243 906 ntBASIC14.71□□□□□ -0.05
LRIT2A6NDA9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 TMEM261P1-201ENST00000604899 340 ntBASIC14.71□□□□□ -0.05
LRIT2A6NDA9 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRIT2A6NDA9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRIT2A6NDA9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AL442647.2-201ENST00000429864 857 ntBASIC14.7□□□□□ -0.06
LRIT2A6NDA9 MYCLP2-201ENST00000449268 967 ntBASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AC190387.1-201ENST00000551683 408 ntBASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.7□□□□□ -0.06
LRIT2A6NDA9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
LRIT2A6NDA9 AC006058.4-201ENST00000624016 1670 ntBASIC14.69□□□□□ -0.06
LRIT2A6NDA9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms