Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC025580.3-201ENST00000617932 1424 ntBASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 TCAF1P1-201ENST00000414990 2232 ntBASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 KRT18P67-201ENST00000432816 1264 ntBASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 OR2I1P-209ENST00000641730 5365 ntBASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TCRBV3S1A0A5B6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 AF186996.4-201ENST00000467186 377 ntBASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 PRELID1P1-202ENST00000567272 903 ntBASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TCRBV3S1A0A5B6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
TCRBV3S1A0A5B6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms