Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 CLUHP2-201ENST00000426660 1303 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 ACTG1P2-201ENST00000415776 1125 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 ACTG1P11-201ENST00000425411 1125 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC013355.1-201ENST00000562625 723 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC026740.1-201ENST00000607068 791 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC138466.3-201ENST00000619983 221 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 AC079336.7-201ENST00000623428 1078 ntBASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HCFC2Q9Y5Z7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 AC253536.4-201ENST00000440539 267 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 FTLP1-201ENST00000449155 526 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 RNMTL1P1-201ENST00000454103 560 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 LDHBP1-201ENST00000455730 1119 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 NUP210P1-202ENST00000504322 710 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 AC106794.1-201ENST00000506935 792 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MIR5572-201ENST00000583188 137 ntBASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HCFC2Q9Y5Z7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HCFC2Q9Y5Z7 AC112504.1-201ENST00000623415 1841 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms