Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL118558.3-201ENST00000607414 1079 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 AC005695.3-201ENST00000614522 232 ntBASIC16.06■□□□□ 0.16
YIPF1Q9Y548 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YIPF1Q9Y548 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 AC104457.1-201ENST00000401024 814 ntBASIC16.05■□□□□ 0.16
YIPF1Q9Y548 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 AC006033.1-201ENST00000440505 426 ntBASIC16.05■□□□□ 0.16
YIPF1Q9Y548 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 AC026691.1-201ENST00000602502 2017 ntBASIC16.05■□□□□ 0.16
YIPF1Q9Y548 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
YIPF1Q9Y548 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 GPAA1P2-201ENST00000417923 928 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 HLA-K-203ENST00000430151 1046 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AL591846.1-201ENST00000451736 433 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 RPSAP36-202ENST00000494591 1261 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 AC015818.8-201ENST00000587907 1519 ntBASIC16.04■□□□□ 0.16
YIPF1Q9Y548 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
YIPF1Q9Y548 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
YIPF1Q9Y548 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms