Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 RPL13AP25-201ENST00000484130 612 ntBASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 MIR4313-201ENST00000580760 101 ntBASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AC068587.10-201ENST00000641210 219 ntBASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDZRN3Q9UPQ7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 RPL13P2-201ENST00000440687 659 ntBASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 EEF1DP4-201ENST00000446006 880 ntBASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 AL136982.4-201ENST00000437689 1740 ntBASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PDZRN3Q9UPQ7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AC006058.4-201ENST00000624016 1670 ntBASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AC004987.2-201ENST00000395959 1148 ntBASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 AC112693.3-201ENST00000624819 1983 ntBASIC19.94■□□□□ 0.78
PDZRN3Q9UPQ7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms