Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 AL136295.7-201ENST00000619226 1200 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 AC079336.7-201ENST00000623428 1078 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 FAM90A7P-201ENST00000382628 1395 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 FAM90A23P-201ENST00000400136 1395 ntBASIC19.43■□□□□ 0.7
SCN11AQ9UI33 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN11AQ9UI33 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AC091046.1-201ENST00000331871 207 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AC021723.1-201ENST00000486306 515 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 GCOM2-201ENST00000509133 1104 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 DUX4L46-201ENST00000566845 751 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 RN7SL190P-201ENST00000582519 257 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AP000346.4-201ENST00000614827 381 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AL133499.1-201ENST00000596207 608 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SCN11AQ9UI33 AL590440.2-201ENST00000641973 1595 ntBASIC19.42■□□□□ 0.7
SCN11AQ9UI33 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AC020763.4-201ENST00000623414 4170 ntBASIC19.41■□□□□ 0.7
SCN11AQ9UI33 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AL008707.1-201ENST00000422498 534 ntBASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 RPS2P36-201ENST00000456516 831 ntBASIC19.41■□□□□ 0.7
SCN11AQ9UI33 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 AL161670.2-201ENST00000557650 1227 ntBASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SCN11AQ9UI33 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.4■□□□□ 0.7
SCN11AQ9UI33 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SCN11AQ9UI33 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms