Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 TTTY23B-201ENST00000442790 549 ntBASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 AC133539.2-201ENST00000604757 467 ntBASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLIP2Q9UDT6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 AL121723.1-201ENST00000445194 1519 ntBASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLIP2Q9UDT6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 TMEM14DP-201ENST00000422205 345 ntBASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 AL442647.2-201ENST00000429864 857 ntBASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 AL359711.2-201ENST00000563105 872 ntBASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.39■□□□□ 0.53
CLIP2Q9UDT6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 KRT8P22-201ENST00000562317 1415 ntBASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLIP2Q9UDT6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLIP2Q9UDT6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms