Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 EEF1DP4-201ENST00000446006 880 ntBASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AC073592.8-201ENST00000624126 511 ntBASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.22□□□□□ -0.77
LINC00474Q9P2X8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AL359183.1-201ENST00000623796 2132 ntBASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 RNA5SP421-201ENST00000516864 134 ntBASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AL079307.3-201ENST00000556114 283 ntBASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC10.21□□□□□ -0.77
LINC00474Q9P2X8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 AC026748.1-201ENST00000624349 3251 ntBASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 REXO1L1P-202ENST00000608646 1974 ntBASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LINC00474Q9P2X8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms