Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COL20A1Q9P218 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
COL20A1Q9P218 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 AC022616.1-201ENST00000518688 554 ntBASIC17.35■□□□□ 0.37
COL20A1Q9P218 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 DUX4L47-201ENST00000566374 394 ntBASIC17.35■□□□□ 0.37
COL20A1Q9P218 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 AC055811.4-201ENST00000624039 1754 ntBASIC17.35■□□□□ 0.37
COL20A1Q9P218 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COL20A1Q9P218 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.35■□□□□ 0.37
COL20A1Q9P218 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COL20A1Q9P218 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
COL20A1Q9P218 AC132872.4-202ENST00000622924 2756 ntBASIC17.34■□□□□ 0.37
COL20A1Q9P218 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL20A1Q9P218 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.33■□□□□ 0.37
COL20A1Q9P218 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL20A1Q9P218 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL20A1Q9P218 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COL20A1Q9P218 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
COL20A1Q9P218 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
COL20A1Q9P218 AL354989.2-201ENST00000435838 1540 ntBASIC17.33■□□□□ 0.37
COL20A1Q9P218 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.33■□□□□ 0.37
COL20A1Q9P218 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AC245100.3-201ENST00000441281 285 ntBASIC17.33■□□□□ 0.36
COL20A1Q9P218 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 CNN2P10-201ENST00000443067 918 ntBASIC17.33■□□□□ 0.36
COL20A1Q9P218 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AP006547.1-201ENST00000563435 692 ntBASIC17.33■□□□□ 0.36
COL20A1Q9P218 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 C18orf15-201ENST00000623680 2534 ntBASIC17.33■□□□□ 0.36
COL20A1Q9P218 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL20A1Q9P218 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COL20A1Q9P218 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms