Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COMMD9Q9P000 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COMMD9Q9P000 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MIR4515-201ENST00000584082 81 ntBASIC13.31□□□□□ -0.28
COMMD9Q9P000 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COMMD9Q9P000 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.31□□□□□ -0.28
COMMD9Q9P000 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 AC140479.7-201ENST00000636301 2332 ntBASIC13.3□□□□□ -0.28
COMMD9Q9P000 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 RNU1-129P-201ENST00000384064 167 ntBASIC13.3□□□□□ -0.28
COMMD9Q9P000 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 U1.21-201ENST00000580816 167 ntBASIC13.3□□□□□ -0.28
COMMD9Q9P000 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 AL031055.1-201ENST00000606362 631 ntBASIC13.3□□□□□ -0.28
COMMD9Q9P000 IFNL4P1-201ENST00000607083 540 ntBASIC13.3□□□□□ -0.28
COMMD9Q9P000 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
COMMD9Q9P000 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
COMMD9Q9P000 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms