Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AC023824.1-201ENST00000562945 2975 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 PIN1P1-201ENST00000412108 996 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AL442647.2-201ENST00000429864 857 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AC004066.1-201ENST00000502488 802 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AL359711.2-201ENST00000563105 872 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 CTBP2P3-201ENST00000585629 1255 ntBASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BLOC1S4Q9NUP1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 AL157414.3-201ENST00000624276 1954 ntBASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 MYCLP2-201ENST00000449268 967 ntBASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 AC008494.3-201ENST00000606615 944 ntBASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BLOC1S4Q9NUP1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BLOC1S4Q9NUP1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
BLOC1S4Q9NUP1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC087499.6-201ENST00000411576 835 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC134915.1-201ENST00000426461 574 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 HLA-K-203ENST00000430151 1046 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC104596.2-201ENST00000512793 793 ntBASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.14■□□□□ 0.33
BLOC1S4Q9NUP1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 345.8 ms