Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TPRX2P-201ENST00000535362 881 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC138761.1-201ENST00000584393 385 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 AL513477.1-201ENST00000602865 2407 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.3□□□□□ -0.28
GCM1Q9NP62 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GCM1Q9NP62 MST1L-201ENST00000442552 2185 ntBASIC13.3□□□□□ -0.28
GCM1Q9NP62 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC007541.1-201ENST00000570282 1469 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CICP13-201ENST00000422015 2789 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC093004.1-201ENST00000508850 424 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC023310.3-201ENST00000557027 670 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC100756.1-201ENST00000562736 682 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC138749.3-201ENST00000567691 622 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC116165.1-201ENST00000611806 668 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC067750.1-201ENST00000608826 6545 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 AC103702.1-201ENST00000548801 2630 ntBASIC13.29□□□□□ -0.28
GCM1Q9NP62 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
GCM1Q9NP62 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GCM1Q9NP62 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
GCM1Q9NP62 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GCM1Q9NP62 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms