Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX8Q9HC52 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.33■□□□□ 0.37
CBX8Q9HC52 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CBX8Q9HC52 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.33■□□□□ 0.37
CBX8Q9HC52 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX8Q9HC52 AC104109.2-201ENST00000602919 1418 ntBASIC17.33■□□□□ 0.36
CBX8Q9HC52 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 TPM4P1-201ENST00000436100 807 ntBASIC17.33■□□□□ 0.36
CBX8Q9HC52 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AC243562.1-201ENST00000560672 389 ntBASIC17.33■□□□□ 0.36
CBX8Q9HC52 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.33■□□□□ 0.36
CBX8Q9HC52 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 LINC01225-203ENST00000563550 1244 ntBASIC17.32■□□□□ 0.36
CBX8Q9HC52 AC145285.3-201ENST00000564603 959 ntBASIC17.32■□□□□ 0.36
CBX8Q9HC52 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.32■□□□□ 0.36
CBX8Q9HC52 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX8Q9HC52 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX8Q9HC52 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX8Q9HC52 MYO15B-237ENST00000642007 4893 ntBASIC17.31■□□□□ 0.36
CBX8Q9HC52 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CBX8Q9HC52 BEND3P1-201ENST00000421591 1944 ntBASIC17.31■□□□□ 0.36
CBX8Q9HC52 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms