Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AL080243.2-201ENST00000418783 582 ntBASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AC015910.1-201ENST00000579400 975 ntBASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 Z97205.2-201ENST00000564697 1639 ntBASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRTM1Q9HBL6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 AL033527.5-202ENST00000641632 1098 ntBASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRTM1Q9HBL6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms