Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 MIR1908-201ENST00000410394 80 ntBASIC16.63■□□□□ 0.25
NXF3Q9H4D5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 YBX1P6-201ENST00000442962 1002 ntBASIC16.63■□□□□ 0.25
NXF3Q9H4D5 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AC079316.1-201ENST00000548397 411 ntBASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 AC008687.7-202ENST00000637404 953 ntBASIC16.63■□□□□ 0.25
NXF3Q9H4D5 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NXF3Q9H4D5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 AC006001.1-201ENST00000325130 474 ntBASIC16.62■□□□□ 0.25
NXF3Q9H4D5 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 AL645937.2-201ENST00000396808 931 ntBASIC16.62■□□□□ 0.25
NXF3Q9H4D5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 TUBB1P2-201ENST00000422712 1306 ntBASIC16.62■□□□□ 0.25
NXF3Q9H4D5 TUBB1P1-201ENST00000503144 1300 ntBASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.62■□□□□ 0.25
NXF3Q9H4D5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.62■□□□□ 0.25
NXF3Q9H4D5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NXF3Q9H4D5 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms